This replaces the existing LIMO linearization algorithm (which internally uses
ancestor set finding and candidate set finding) with the much more performant
spanning-forest linearization algorithm.
This removes the old candidate-set search algorithm, and several of its tests,
benchmarks, and needed utility code.
The worst case time per cost is similar to the previous algorithm, so
ACCEPTABLE_ITERS is unchanged.
Since cluster_linearize.h does not actually have a Cluster type anymore, it is more
appropriate to rename the index type to DepGraphIndex.
-BEGIN VERIFY SCRIPT-
sed -i 's/Data type to represent transaction indices in clusters./Data type to represent transaction indices in DepGraphs and the clusters they represent./' $(git grep -l 'using ClusterIndex')
sed -i 's|\<ClusterIndex\>|DepGraphIndex|g' $(git grep -l 'ClusterIndex')
-END VERIFY SCRIPT-
This commits introduces support in DepGraph for the transaction positions to be
non-continuous. Specifically, it adds:
* DepGraph::RemoveTransactions which removes 0 or more positions from a DepGraph.
* DepGraph::Positions() to get a set of which positions are in use.
* DepGraph::PositionRange() to get the highest used position in a DepGraph + 1.
In addition, it extends the DepGraphFormatter format to support holes in a
compatible way (it serializes non-holey DepGraphs identically to the old code,
and deserializes them the same way)
This introduces a bespoke fuzzing-focused serialization format for DepGraphs,
and then tests that this format can represent any graph, roundtrips, and then
uses that to test the correctness of DepGraph itself.
This forms the basis for future fuzz tests that need to work with interesting
graphs.
